Transcript: lnc-SYPL2-2:2

Basic information

LNCipedia transcript ID: lnc-SYPL2-2:2 
LNCipedia gene ID: lnc-SYPL2-2
Location (hg38): chr1:109426813-109431109
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2901 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000012184.1|MICT00000016854.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.657 non-coding 
CPAT coding probability 14.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SYPL2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SYPL2-2:2
5.0 lnc-SYPL2-2:2
5.1 lnc-GSTM5-12:2
5.2 lnc-SYPL2-2:2