Transcript: lnc-SYTL3-150:3

Basic information

LNCipedia transcript ID: lnc-SYTL3-150:3 
LNCipedia gene ID: lnc-SYTL3-150
Location (hg38): chr6:158820355-158822190
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 290 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT115816; FPKM1_group_28777_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SYTL3-150:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf99-1:3
4.0 EZR-AS1:3
4.1 EZR-AS1:3
5.0 EZR-AS1:3
5.1 lnc-SYTL3-147:3
5.2 lnc-SYTL3-150:3