Transcript: lnc-TACR1-1:5

Basic information

LNCipedia transcript ID: lnc-TACR1-1:5 
LNCipedia gene ID: lnc-TACR1-1
Location (hg38): chr2:74953025-74958879
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 997 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236209.1|MICT00000192275.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.5992 non-coding 
CPAT coding probability 62.90% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TACR1-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TACR1-1:5
5.0 lnc-TACR1-1:5
5.1 lnc-GKN2-174:5
5.2 lnc-TACR1-1:5