Transcript: lnc-TAF13-2:2

Basic information

LNCipedia transcript ID: lnc-TAF13-2:2 
LNCipedia gene ID: lnc-TAF13-2
Location (hg38): chr1:109087971-109090891
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2921 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273382.1|ENST00000608574.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.2964 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAF13-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TAF13-2:2
5.0 lnc-TAF13-2:2
5.1 lnc-LAMTOR5-27:1
5.2 lnc-TAF13-2:2