Transcript: lnc-TAF3-1:6

Basic information

LNCipedia transcript ID: lnc-TAF3-1:6 
LNCipedia gene ID: lnc-TAF3-1
Location (hg38): chr10:8049854-8053485
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2817 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232638.1|HBMT00000139155.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.3695 non-coding 
CPAT coding probability 3.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAF3-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GATA3-1:6
5.0 lnc-GATA3-1:6
5.1 lnc-NPY4R2-429:1
5.2 lnc-TAF3-1:6