Transcript: lnc-TAF3-1:8

Basic information

LNCipedia transcript ID: lnc-TAF3-1:8 
LNCipedia gene ID: lnc-TAF3-1
Location (hg38): chr10:8051231-8054426
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3196 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA151:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -49.2106 non-coding 
CPAT coding probability 30.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAF3-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GATA3-1:4
4.1 lnc-GATA3-1:4
5.0 lnc-GATA3-1:4
5.1 lnc-NPY4R2-429:3
5.2 lnc-TAF3-1:8