Transcript: lnc-TAF3-1:9

Basic information

LNCipedia transcript ID: lnc-TAF3-1:9 
LNCipedia gene ID: lnc-TAF3-1
Location (hg38): chr10:8051238-8053084
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 705 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232638.1|ENST00000418270.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -319.3893 non-coding 
CPAT coding probability 17.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAF3-1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GATA3-1:7
5.0 lnc-GATA3-1:7
5.1 lnc-NPY4R2-429:4
5.2 lnc-TAF3-1:9