Transcript: lnc-TAF4B-3:1

Basic information

LNCipedia transcript ID: lnc-TAF4B-3:1 
LNCipedia gene ID: lnc-TAF4B-3
Location (hg38): chr18:26806501-26822583
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 437 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026303; NONHSAT058762
Alternative gene names: XLOC_012648; linc-DSG1-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.0173 non-coding 
CPAT coding probability 1.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAF4B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TAF4B-2:1
3.1 lnc-TAF4B-3:1
4.0 lnc-TAF4B-3:1
4.1 lnc-TAF4B-3:1
5.0 lnc-TAF4B-3:1
5.1 lnc-RIOK3-62:1
5.2 lnc-TAF4B-3:1