Transcript: lnc-TAF7-18:2

Basic information

LNCipedia transcript ID: lnc-TAF7-18:2 
LNCipedia gene ID: lnc-TAF7-18
Ensembl Gene ID: ENSG00000278936
Ensembl Transcript ID: ENST00000624089
Location (hg38): chr5:141183732-141184461
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 484 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000624089.1
Alternative gene names: ENSG00000278936.1; CH17-140K24.7; AC244517.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAF7-18:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DIAPH1-18:2
5.1 lnc-DIAPH1-18:2
5.2 lnc-TAF7-18:2