Transcript: lnc-TAF7-3:1

Basic information

LNCipedia transcript ID: lnc-TAF7-3:1 
LNCipedia gene ID: lnc-TAF7-3
Location (hg38): chr5:141223343-141226039
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1950 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000515856
Alternative gene names: ENSG00000250004


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 72.987 coding 
CPAT coding probability 66.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TAF7-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC25A2-2:1
3.1 lnc-SLC25A2-2:1
4.0 lnc-SLC25A2-2:1
4.1 lnc-SLC25A2-2:1
5.0 lnc-SLC25A2-2:1
5.1 lnc-DIAPH1-14:1
5.2 lnc-TAF7-3:1