Transcript: lnc-TAGAP-1:3

Basic information

LNCipedia transcript ID: lnc-TAGAP-1:3 
LNCipedia gene ID: lnc-TAGAP-1
Ensembl Gene ID: ENSG00000226032
Ensembl Transcript ID: ENST00000645980
Location (hg38): chr6:159042192-159095823
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 567 bp
Exons: 7
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000645980.1
Alternative gene names: ENSG00000226032.2; AL035530.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -152.0134 non-coding 
CPAT coding probability 92.65% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TAGAP-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TAGAP-1:3
5.1 lnc-TAGAP-1:3
5.2 lnc-TAGAP-1:3