Transcript: lnc-TAGAP-4:2

Basic information

LNCipedia transcript ID: lnc-TAGAP-4:2 
LNCipedia gene ID: lnc-TAGAP-4
Location (hg38): chr6:159165909-159167353
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 385 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000419064.2
Alternative gene names: ENSG00000233682.2; RP11-13P5.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -300.5666 non-coding 
CPAT coding probability 4.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAGAP-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TAGAP-4:2
4.0 lnc-TAGAP-4:2
4.1 lnc-TAGAP-4:2
5.0 lnc-TAGAP-4:2
5.1 lnc-TAGAP-4:2
5.2 lnc-TAGAP-4:2