Transcript: lnc-TAGAP-4:5

Basic information

LNCipedia transcript ID: lnc-TAGAP-4:5 
LNCipedia gene ID: lnc-TAGAP-4
Location (hg38): chr6:159165756-159170032
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 989 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233682.2|HBMT00001264531.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -149.1194 non-coding 
CPAT coding probability 5.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAGAP-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TAGAP-4:5
5.0 lnc-TAGAP-4:5
5.1 lnc-TAGAP-4:5
5.2 lnc-TAGAP-4:5