Transcript: lnc-TAGAP-4:6

Basic information

LNCipedia transcript ID: lnc-TAGAP-4:6 
LNCipedia gene ID: lnc-TAGAP-4
Location (hg38): chr6:159167248-159170032
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 557 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233682.2|ENST00000608986.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -149.1194 non-coding 
CPAT coding probability 3.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAGAP-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TAGAP-4:6
5.0 lnc-TAGAP-4:6
5.1 lnc-TAGAP-4:6
5.2 lnc-TAGAP-4:6