Transcript: lnc-TAOK1-5:1

Basic information

LNCipedia transcript ID: lnc-TAOK1-5:1 
LNCipedia gene ID: lnc-TAOK1-5
Location (hg38): chr17:29352069-29404100
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 414 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000584958.1; RP11-296K13.4-001; OTTHUMT00000447788.1; NONHSAT052700
Alternative gene names: ENSG00000266111.1; RP11-296K13.4; OTTHUMG00000179549.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAOK1-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TAOK1-1:1
4.0 lnc-TAOK1-1:1
4.1 lnc-TAOK1-1:1
5.0 lnc-TAOK1-1:1
5.1 lnc-PIPOX-27:1
5.2 lnc-TAOK1-5:1