Transcript: lnc-TAOK3-1:8

Basic information

LNCipedia transcript ID: lnc-TAOK3-1:8 
LNCipedia gene ID: lnc-TAOK3-1
Location (hg38): chr12:118117613-118121124
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 366 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020942; NONHSAT031032
Alternative gene names: XLOC_010212; linc-VSIG10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.4557 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAOK3-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TAOK3-1:8
3.1 lnc-TAOK3-1:8
4.0 lnc-TAOK3-1:8
4.1 lnc-TAOK3-1:8
5.0 lnc-TAOK3-1:8
5.1 lnc-FBXO21-12:12
5.2 lnc-TAOK3-1:8