Transcript: lnc-TAOK3-7:2

Basic information

LNCipedia transcript ID: lnc-TAOK3-7:2 
LNCipedia gene ID: lnc-TAOK3-7
Location (hg38): chr12:118954772-118956090
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 628 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020949; NONHSAT031061
Alternative gene names: XLOC_010216; linc-TAOK3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.254 non-coding 
CPAT coding probability 40.34% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TAOK3-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TAOK3-7:2
3.1 lnc-TAOK3-7:2
4.0 lnc-TAOK3-7:2
4.1 lnc-TAOK3-7:2
5.0 lnc-TAOK3-7:2
5.1 lnc-GCN1-20:3
5.2 lnc-TAOK3-7:2