Transcript: lnc-TAOK3-7:3

Basic information

LNCipedia transcript ID: lnc-TAOK3-7:3 
LNCipedia gene ID: lnc-TAOK3-7
Location (hg38): chr12:118954772-118955614
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 375 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00020948
Alternative gene names: XLOC_010216; linc-TAOK3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.254 non-coding 
CPAT coding probability 15.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAOK3-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TAOK3-7:3
3.1 lnc-TAOK3-7:3
4.0 lnc-TAOK3-7:3
4.1 lnc-TAOK3-7:3
5.0 lnc-TAOK3-7:3
5.1 lnc-GCN1-20:5
5.2 lnc-TAOK3-7:3