Transcript: lnc-TARSL2-4:2

Basic information

LNCipedia transcript ID: lnc-TARSL2-4:2 
LNCipedia gene ID: lnc-TARSL2-4
Location (hg38): chr15:101737109-101744804
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 625 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000560292.2
Alternative gene names: ENSG00000259658.3; RP11-89K11.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.0339 non-coding 
CPAT coding probability 8.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TARSL2-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-89K11.1.1-4:2
4.1 lnc-RP11-89K11.1.1-4:2
5.0 lnc-RP11-89K11.1.1-4:2
5.1 lnc-CIB1-128:2
5.2 lnc-TARSL2-4:2