Transcript: lnc-TATDN3-1:1

Basic information

LNCipedia transcript ID: lnc-TATDN3-1:1 
LNCipedia gene ID: lnc-TATDN3-1
Location (hg38): chr1:212824027-212824505
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 479 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT009402
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.6957 non-coding 
CPAT coding probability 17.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TATDN3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TATDN3-1:1
4.0 lnc-TATDN3-1:1
4.1 lnc-TATDN3-1:1
5.0 lnc-TATDN3-1:1
5.1 lnc-DTL-23:1
5.2 lnc-TATDN3-1:1