Transcript: lnc-TBC1D22A-4:12

Basic information

LNCipedia transcript ID: lnc-TBC1D22A-4:12 
LNCipedia gene ID: lnc-TBC1D22A-4
Location (hg38): chr22:47631703-47859342
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 152544 bp
Exons: 10
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224271.1|ENCT00000279701.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.6397 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D22A-4:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TBC1D22A-4:12
5.0 lnc-TBC1D22A-4:12
5.1 lnc-GRAMD4-8:10
5.2 lnc-TBC1D22A-4:12