Transcript: lnc-TBC1D22A-4:6

Basic information

LNCipedia transcript ID: lnc-TBC1D22A-4:6 
LNCipedia gene ID: lnc-TBC1D22A-4
Location (hg38): chr22:47631699-47644179
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2557 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA924:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.7148 non-coding 
CPAT coding probability 5.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D22A-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TBC1D22A-4:6
4.1 lnc-TBC1D22A-4:6
5.0 lnc-TBC1D22A-4:6
5.1 lnc-GRAMD4-8:4
5.2 lnc-TBC1D22A-4:6