Transcript: lnc-TBC1D3F-1:6

Basic information

LNCipedia transcript ID: lnc-TBC1D3F-1:6 
LNCipedia gene ID: lnc-TBC1D3F-1
Location (hg38): chr17:36495933-36499344
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1038 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT053217
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 379.0957 coding 
CPAT coding probability 88.88% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TBC1D3F-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBC1D3G-1:1
4.0 lnc-TBC1D3G-1:1
4.1 lnc-TBC1D3G-1:1
5.0 lnc-TBC1D3G-1:1
5.1 lnc-SRCIN1-56:1
5.2 lnc-TBC1D3F-1:6