Transcript: lnc-TBC1D8-2:4

Basic information

LNCipedia transcript ID: lnc-TBC1D8-2:4 
LNCipedia gene ID: lnc-TBC1D8-2
RefSeq ID: NR_110213
Location (hg38): chr2:100972648-100977161
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 771 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110213; NR_110213.1
Alternative gene names: LOC101927142


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.1822 non-coding 
CPAT coding probability 15.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D8-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBC1D8-2:4
4.0 lnc-TBC1D8-2:4
4.1 lnc-TBC1D8-2:4
5.0 lnc-TBC1D8-2:4
5.1 lnc-AFF3-20:2
5.2 lnc-TBC1D8-2:4