Transcript: lnc-TBP-9:1

Basic information

LNCipedia transcript ID: lnc-TBP-9:1 
LNCipedia gene ID: lnc-TBP-9
Location (hg38): chr6:170306602-170315548
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 306 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3342_chr6:170615689-170624636_whiteBloodCell
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBP-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBP-9:1
4.0 lnc-TBP-9:1
4.1 lnc-TBP-9:1
5.0 lnc-TBP-9:1
5.1 lnc-SYTL3-133:1
5.2 lnc-TBP-9:1