Transcript: lnc-TBXAS1-3:5

Basic information

LNCipedia transcript ID: lnc-TBXAS1-3:5 
LNCipedia gene ID: lnc-TBXAS1-3
Location (hg38): chr7:139778256-139797483
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 728 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT123654
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.0358 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBXAS1-3:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBXAS1-3:5
4.0 lnc-TBXAS1-3:5
4.1 lnc-TBXAS1-3:5
5.0 lnc-TBXAS1-3:5
5.1 lnc-TBXAS1-3:5
5.2 lnc-TBXAS1-3:5