Transcript: lnc-TCEAL4-1:1

Basic information

LNCipedia transcript ID: lnc-TCEAL4-1:1 
LNCipedia gene ID: lnc-TCEAL4-1
Location (hg38): chrX:103498795-103499282
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 418 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000412375.1; LL0XNC01-250H12.2-001; OTTHUMT00000057715.1; NONHSAT138036
Alternative gene names: ENSG00000228885.1; LL0XNC01-250H12.2; OTTHUMG00000022101.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.4697 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCEAL4-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TCEAL4-1:1
4.0 lnc-TCEAL4-1:1
4.1 lnc-TCEAL4-1:1
5.0 lnc-TCEAL4-1:1
5.1 lnc-TEX13C-227:1
5.2 lnc-TCEAL4-1:1