Transcript: lnc-TCF21-3:3

Basic information

LNCipedia transcript ID: lnc-TCF21-3:3 
LNCipedia gene ID: lnc-TCF21-3
Location (hg38): chr6:133988072-133990428
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2357 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT115011
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.0878 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCF21-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBPL1-3:1
4.0 lnc-TBPL1-3:1
4.1 lnc-TBPL1-3:1
5.0 lnc-TBPL1-3:1
5.1 lnc-NCOA7-36:1
5.2 lnc-TCF21-3:3