Transcript: lnc-TCF4-8:1

Basic information

LNCipedia transcript ID: lnc-TCF4-8:1 
LNCipedia gene ID: lnc-TCF4-8
Location (hg38): chr18:55773317-55780158
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6724 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026525; NONHSAT059377
Alternative gene names: XLOC_012849; linc-TCF4-1; TCONS_00026208


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.2319 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCF4-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TCF4-2:2
3.1 lnc-TCF4-1:2
4.0 LINC01415:3
4.1 LINC01415:3
5.0 LINC01415:3
5.1 lnc-MBD2-17:1
5.2 lnc-TCF4-8:1