Transcript: lnc-TCF7-1:4

Basic information

LNCipedia transcript ID: lnc-TCF7-1:4 
LNCipedia gene ID: lnc-TCF7-1
RefSeq ID: NR_134247
Location (hg38): chr5:133968689-133970223
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 577 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134247.1
Alternative gene names: LOC105379183


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -100.6503 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCF7-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PDLIM4-40:1
5.1 lnc-PDLIM4-40:1
5.2 lnc-TCF7-1:4