Transcript: lnc-TCHP-3:3

Basic information

LNCipedia transcript ID: lnc-TCHP-3:3 
LNCipedia gene ID: lnc-TCHP-3
Location (hg38): chr12:109880673-109888467
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 731 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249094.2|ENST00000446473.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -17.6092 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCHP-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TCHP-3:3
5.0 lnc-TCHP-3:3
5.1 lnc-TCHP-3:3
5.2 lnc-TCHP-3:3