Transcript: lnc-TCIRG1-2:17

Basic information

LNCipedia transcript ID: lnc-TCIRG1-2:17 
LNCipedia gene ID: lnc-TCIRG1-2
Location (hg38): chr11:68121888-68130515
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 994 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255236.2|ENCT00000068685.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.9121 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCIRG1-2:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TCIRG1-2:17
5.0 lnc-TCIRG1-2:17
5.1 lnc-TCIRG1-2:17
5.2 lnc-TCIRG1-2:17