Transcript: lnc-TCP11-2:4

Basic information

LNCipedia transcript ID: lnc-TCP11-2:4 
LNCipedia gene ID: lnc-TCP11-2
Location (hg38): chr6:35190825-35259963
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 52605 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272374.1|ENCT00000384581.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 366.4096 coding 
CPAT coding probability 3.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TCP11-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TCP11-2:4
5.0 lnc-TCP11-2:4
5.1 lnc-SPDEF-12:1
5.2 lnc-TCP11-2:4