Transcript: lnc-TCP11-2:7

Basic information

LNCipedia transcript ID: lnc-TCP11-2:7 
LNCipedia gene ID: lnc-TCP11-2
Location (hg38): chr6:35200848-35259455
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 442 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272374.1|FTMT22100034703.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCP11-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TCP11-2:7
5.0 lnc-TCP11-2:7
5.1 lnc-SPDEF-12:6
5.2 lnc-TCP11-2:7