Transcript: lnc-TCP11X2-2:1

Basic information

LNCipedia transcript ID: lnc-TCP11X2-2:1 
LNCipedia gene ID: lnc-TCP11X2-2
Location (hg38): chrX:102425428-102428074
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1325 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT137970
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.4225 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TCP11X2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMSB15A-2:1
4.0 lnc-TMSB15A-2:1
4.1 lnc-TMSB15A-2:1
5.0 lnc-TMSB15A-2:1
5.1 lnc-RAB40A-27:1
5.2 lnc-TCP11X2-2:1