Transcript: lnc-TDRD3-22:1

Basic information

LNCipedia transcript ID: lnc-TDRD3-22:1 
LNCipedia gene ID: lnc-TDRD3-22
Location (hg38): chr13:64764042-64776198
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 611 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_866_chr13:65338173-65350330_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.6917 non-coding 
CPAT coding probability 2.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-22:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL445989.1-22:1
4.0 lnc-AL445989.1-22:1
4.1 lnc-AL445989.1-22:1
5.0 lnc-AL445989.1-22:1
5.1 lnc-KL-278:1
5.2 lnc-TDRD3-22:1