Transcript: lnc-TDRD3-2:6

Basic information

LNCipedia transcript ID: lnc-TDRD3-2:6 
LNCipedia gene ID: lnc-TDRD3-2
Location (hg38): chr13:63593484-63635510
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 811 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021811; NONHSAT034165
Alternative gene names: XLOC_010411; linc-C13orf34-14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.0554 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL445989.1-2:1
3.1 lnc-AL445989.1-2:1
4.0 lnc-AL445989.1-2:1
4.1 lnc-AL445989.1-2:1
5.0 lnc-AL445989.1-2:1
5.1 lnc-KL-273:3
5.2 lnc-TDRD3-2:6