Transcript: lnc-TDRD3-5:1

Basic information

LNCipedia transcript ID: lnc-TDRD3-5:1 
LNCipedia gene ID: lnc-TDRD3-5
Location (hg38): chr13:61565805-61573857
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 310 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021807; NONHSAT034129
Alternative gene names: XLOC_010406; linc-C13orf34-19


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.7429 non-coding 
CPAT coding probability 9.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TDRD3-3:1
3.1 lnc-TDRD3-5:1
4.0 lnc-TDRD3-5:1
4.1 lnc-TDRD3-5:1
5.0 lnc-TDRD3-5:1
5.1 lnc-KL-266:1
5.2 lnc-TDRD3-5:1