Transcript: lnc-TDRD9-4:2

Basic information

LNCipedia transcript ID: lnc-TDRD9-4:2 
LNCipedia gene ID: lnc-TDRD9-4
Location (hg38): chr14:103874960-103880333
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1176 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022642; NONHSAT040226
Alternative gene names: XLOC_010945; linc-TDRD9-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.5842 non-coding 
CPAT coding probability 3.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD9-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTD-2134A5.2.1-2:1
3.1 lnc-CTD-2134A5.2.1-2:1
4.0 lnc-CTD-2134A5.2.1-2:1
4.1 lnc-CTD-2134A5.2.1-2:1
5.0 lnc-CTD-2134A5.2.1-2:1
5.1 lnc-KLC1-5:2
5.2 lnc-TDRD9-4:2