Transcript: lnc-TEAD4-1:1

Basic information

LNCipedia transcript ID: lnc-TEAD4-1:1 
LNCipedia gene ID: lnc-TEAD4-1
Location (hg38): chr12:3041437-3044950
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3485 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000513358; ENST00000513358.2; RP11-253E3.3-001; OTTHUMT00000398625.1; NONHSAT025500
Alternative gene names: ENSG00000250899; RP11-253E3.3; ENSG00000250899.2; OTTHUMG00000168179.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.1023 non-coding 
CPAT coding probability 3.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TEAD4-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TEAD4-1:1
3.1 lnc-TEAD4-1:1
4.0 lnc-TEAD4-1:1
4.1 lnc-TEAD4-1:1
5.0 lnc-TEAD4-1:1
5.1 lnc-CLEC4D-123:1
5.2 lnc-TEAD4-1:1