Transcript: lnc-TEAD4-1:2

Basic information

LNCipedia transcript ID: lnc-TEAD4-1:2 
LNCipedia gene ID: lnc-TEAD4-1
Ensembl Gene ID: ENSG00000250899
Ensembl Transcript ID: ENST00000513358
Location (hg38): chr12:3041437-3044950
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3514 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT025501; ENST00000513358.3
Alternative gene names: ENSG00000250899.3; RP11-253E3.3; AC125807.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.1023 non-coding 
CPAT coding probability 3.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TEAD4-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TEAD4-1:2
4.0 lnc-TEAD4-1:2
4.1 lnc-TEAD4-1:2
5.0 lnc-TEAD4-1:2
5.1 lnc-CLEC4D-123:2
5.2 lnc-TEAD4-1:2