Transcript: lnc-TEKT3-1:1

Basic information

LNCipedia transcript ID: lnc-TEKT3-1:1 
LNCipedia gene ID: lnc-TEKT3-1
Location (hg38): chr17:15240427-15244396
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3970 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000584017.1; RP11-849N15.2-001; OTTHUMT00000442216.1; NONHSAT145792
Alternative gene names: ENSG00000265308.1; RP11-849N15.2; OTTHUMG00000178497.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.6071 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TEKT3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TEKT3-1:1
4.0 lnc-TEKT3-1:1
4.1 lnc-TEKT3-1:1
5.0 lnc-TEKT3-1:1
5.1 lnc-COPS3-82:1
5.2 lnc-TEKT3-1:1