Transcript: lnc-TENM3-3:3

Basic information

LNCipedia transcript ID: lnc-TENM3-3:3 
LNCipedia gene ID: lnc-TENM3-3
Location (hg38): chr4:180058941-180282181
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 30872 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000071146.1|MICT00000275142.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.5433 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TENM3-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ODZ3-3:4
5.0 lnc-ODZ3-3:4
5.1 lnc-FAM149A-67:3
5.2 lnc-TENM3-3:3