Transcript: lnc-TENM4-4:6

Basic information

LNCipedia transcript ID: lnc-TENM4-4:6 
LNCipedia gene ID: lnc-TENM4-4
Location (hg38): chr11:80746166-80762777
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1200 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019718; NONHSAT023326
Alternative gene names: XLOC_009515; linc-ODZ4-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.354 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TENM4-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ODZ4-4:2
3.1 lnc-ODZ4-4:2
4.0 lnc-ODZ4-4:2
4.1 lnc-ODZ4-4:2
5.0 lnc-ODZ4-4:2
5.1 lnc-TENM4-12:4
5.2 lnc-TENM4-4:6