Transcript: lnc-TERT-4:1

Basic information

LNCipedia transcript ID: lnc-TERT-4:1 
LNCipedia gene ID: lnc-TERT-4
Location (hg38): chr5:1097066-1102013
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2894 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_2841_chr5:1097180-1101427_adrenal
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.9486 non-coding 
CPAT coding probability 7.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TERT-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TERT-4:1
4.0 lnc-TERT-4:1
4.1 lnc-TERT-4:1
5.0 lnc-TERT-4:1
5.1 lnc-IRX2-25:1
5.2 lnc-TERT-4:1