Transcript: lnc-TEX29-7:1

Basic information

LNCipedia transcript ID: lnc-TEX29-7:1 
LNCipedia gene ID: lnc-TEX29-7
Location (hg38): chr13:111239140-111250958
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 782 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_923_chr13:111891486-111903303_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.3083 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TEX29-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C13orf16-7:1
4.0 lnc-C13orf16-7:1
4.1 lnc-C13orf16-7:1
5.0 lnc-C13orf16-7:1
5.1 lnc-COL4A2-26:1
5.2 lnc-TEX29-7:1