Transcript: lnc-TEX35-2:1

Basic information

LNCipedia transcript ID: lnc-TEX35-2:1 
LNCipedia gene ID: lnc-TEX35-2
Location (hg38): chr1:178569477-178570415
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 939 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT007824; FPKM1_group_1736_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.9517 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TEX35-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf220-2:1
4.0 lnc-C1orf220-2:1
4.1 lnc-C1orf220-2:1
5.0 lnc-C1orf220-2:1
5.1 lnc-SOAT1-16:1
5.2 lnc-TEX35-2:1