Transcript: lnc-TEX44-4:2

Basic information

LNCipedia transcript ID: lnc-TEX44-4:2 
LNCipedia gene ID: lnc-TEX44-4
Location (hg38): chr2:231514555-231520080
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1695 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047031.1|MICT00000209544.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -51.6272 non-coding 
CPAT coding probability 2.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TEX44-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC017104.2.1-2:3
5.0 lnc-AC017104.2.1-2:3
5.1 lnc-B3GNT7-7:2
5.2 lnc-TEX44-4:2