Transcript: lnc-TFDP2-13:1

Basic information

LNCipedia transcript ID: lnc-TFDP2-13:1 
LNCipedia gene ID: lnc-TFDP2-13
Location (hg38): chr3:141368283-141370304
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2022 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066312.1|FTMT21000006551.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.7228 non-coding 
CPAT coding probability 1.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TFDP2-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TFDP2-13:1
5.0 lnc-TFDP2-13:1
5.1 lnc-TFDP2-13:1
5.2 lnc-TFDP2-13:1