Transcript: lnc-TFDP2-1:4

Basic information

LNCipedia transcript ID: lnc-TFDP2-1:4 
LNCipedia gene ID: lnc-TFDP2-1
Location (hg38): chr3:141995096-142149537
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 575 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT092461
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 6.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TFDP2-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GK5-1:2
4.0 lnc-TFDP2-1:4
4.1 lnc-TFDP2-1:4
5.0 lnc-TFDP2-1:4
5.1 lnc-TFDP2-1:4
5.2 lnc-TFDP2-1:4